SNP Profiles of PNG 215 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
1._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
2._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
3._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
4._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
5._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
6._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
7._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
8._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
9._PNG_215	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
10._RUQ_1293	_	_	AC	GG	CT	_	AA	GG	AG	CC	_	_	AT	_
11._RUQ_1293	_	_	AC	_	_	_	_	_	AG	_	AG	_	_	_
12._GC-01-107-6-04	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
13._GC-01-107-6-04	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
14._GC-01-107-6-04	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
15._GC-01-107-6-04	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
16._GC-01-107-6-04	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
17._GC-01-084-5-01	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
18._GC-01-084-5-01	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
19._GC-01-084-5-01	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
20._GC-01-084-5-01	CC	CC	AC	GG	CT	GG	AA	GG	AG	CC	AG	AG	AT	CG
21._RUQ_1293	GG	CC	AC	CC	AG	GG	AA	CC	AG	GG	AG	AG	AT	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	GT	CC	CC	CT	CC	TT	GT	GG	GT	AC	CC
1._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
2._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
3._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
4._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
5._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
6._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
7._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
8._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
9._PNG_215	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
10._RUQ_1293	AA	CC	CT	GT	CC	CC	_	CC	_	GT	_	_	_	CC
11._RUQ_1293	_	AC	_	_	CC	CC	CT	_	TT	GT	GG	_	AC	CC
12._GC-01-107-6-04	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
13._GC-01-107-6-04	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
14._GC-01-107-6-04	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
15._GC-01-107-6-04	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
16._GC-01-107-6-04	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
17._GC-01-084-5-01	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
18._GC-01-084-5-01	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
19._GC-01-084-5-01	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
20._GC-01-084-5-01	AA	CC	CT	GT	CC	CC	CT	CC	CC	GT	GG	GT	AC	CC
21._RUQ_1293	_	CC	_	AC	CC	CC	AG	GG	_	AC	GG	AC	AC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	CG	CC	AA	CT	GG	AG	TT	GT	CT	CT	CT	GG	GG	X_X
1._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
2._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
3._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
4._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
5._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
6._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
7._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
8._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
9._PNG_215	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
10._RUQ_1293	_	CC	AA	CT	_	_	_	GT	_	_	CT	GG	GG	X_X
11._RUQ_1293	_	_	AA	_	_	_	_	GT	_	_	_	GG	_	X_X
12._GC-01-107-6-04	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
13._GC-01-107-6-04	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
14._GC-01-107-6-04	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
15._GC-01-107-6-04	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
16._GC-01-107-6-04	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
17._GC-01-084-5-01	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
18._GC-01-084-5-01	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
19._GC-01-084-5-01	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
20._GC-01-084-5-01	CG	CC	AA	CT	GG	AG	TT	GT	TT	CT	CT	GG	GG	X_X
21._RUQ_1293	_	GG	AA	AG	CC	AG	_	AA	AG	AG	AG	CC	GG	X_X

Input profile: PNG_215 RUQ_1293

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PNG_215

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1604 5

Dapeng Zhang, 2016

2._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 4

Dapeng Zhang, 2016

3._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 3

Dapeng Zhang, 2016

4._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 2

Dapeng Zhang, 2016

5._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 1

Dapeng Zhang, 2016

6._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 4

Dapeng Zhang, 2016

7._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 3

Dapeng Zhang, 2016

8._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 2

Dapeng Zhang, 2016

9._PNG_215

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

10._PNG_215 RUQ_1293

identical
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

11._PNG_215 RUQ_1293

96.7 %
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

12._PNG_215 GC-01-107-6-04

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

13._PNG_215 GC-01-107-6-04

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

14._PNG_215 GC-01-107-6-04

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

15._PNG_215 GC-01-107-6-04

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

16._PNG_215 GC-01-107-6-04

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

17._PNG_215 GC-01-084-5-01

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

18._PNG_215 GC-01-084-5-01

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

19._PNG_215 GC-01-084-5-01

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

20._PNG_215 GC-01-084-5-01

96.3 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

21._PNG_215 RUQ_1293

47.2 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484